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| Status |
Public on Dec 21, 2015 |
| Title |
ChIP-seq analysis of MBD3 in human breast cancer cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Chromatin immunoprecipitation followed by massively parallel sequencing (ChIP-seq) is a powerful approach to identify the genome-wide localization of protein of interest. However, to perform ChIP-seq experiments for large protein complex, such as Mi-2/NuRD complex, is still challenging. Here, we present high-quality MBD3 ChIP-seq data in human breast cancer cells, MDA-MB-231.
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| Overall design |
MBD3 ChIP-seq experiment was perform using human breast cancer cells, MDA-MB-231. Two bilogical replicates were prepared.
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| Contributor(s) |
Shimbo T, Takaku M, Wade PA |
| Citation(s) |
26981404 |
| Submission date |
Dec 17, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Takashi Shimbo |
| E-mail(s) |
shimbot@niehs.nih.gov
|
| Organization name |
NIH/NIEHS
|
| Street address |
111 TW Alexander Dr.
|
| City |
RTP |
| ZIP/Postal code |
27709 |
| Country |
USA |
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| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA306261 |
| SRA |
SRP067510 |
