|
| Status |
Public on May 24, 2016 |
| Title |
RNA-Seq of SLNCR1 over-expression in the melanoma cell line A375 |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-Seq was used to profile transcriptional changes induced by overexpression of the long non-coding RNA SLNCR1, as well as mutant version SLNCR1 delta conserved and SLNCR1 conserved.
|
| |
|
| Overall design |
The A375 melanoma cell line was transfected with pcDNA3.1 (-) expressing either full length SLNCR1, SLNCR1 delta conserved, or SLNCR1 conserved.
|
| |
|
| Contributor(s) |
Schmidt K, Novina C |
| Citation(s) |
27210747 |
| Submission date |
Feb 13, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Carl Novina |
| E-mail(s) |
carl_novina@dfci.harvard.edu
|
| Organization name |
Dana-Farber Cancer Institute
|
| Department |
Cancer Immunology
|
| Lab |
Carl Novina
|
| Street address |
450 Brookline Ave
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (8)
|
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| This SubSeries is part of SuperSeries: |
| GSE77903 |
RNA-Seq of over-expression and knockdown of the lncRNA SLNCR1 in melanoma cells |
|
| Relations |
| BioProject |
PRJNA311990 |
| SRA |
SRP070081 |
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