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| Status |
Public on Feb 09, 2017 |
| Title |
In Silico transcriptional regulatory networks during tomato fruit ripening |
| Organism |
Solanum lycopersicum |
| Experiment type |
Expression profiling by array
|
| Summary |
The aim of this study is to generate gene regulatory networks by analyzing Affymetrix GeneChip expression datasets from four different stages of tomato fruit ripening, Breaker (Br), Turning (Tu), Pink (Pk) and Red Ripe (RR) with the LeMoNe algorithm in order to identify co expression modules and their putative regulatory TFs.
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| |
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| Overall design |
9 samples were analyzed in total, mainly 2 replicates for each developmental stage.
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| |
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| Contributor(s) |
Kalaitzis P, Perrakis A, Bita CE, Arhondakis S |
| Citation(s) |
27625653 |
| Submission date |
Feb 27, 2016 |
| Last update date |
Feb 11, 2017 |
| Contact name |
Panagiotis Kalaitzis |
| E-mail(s) |
panagiot@maich.gr
|
| Phone |
+30 28210 35030
|
| Organization name |
Mediterranean Agronomic Institute of Chania (MAICh)
|
| Department |
Horticultural Genetics and Biotechnology
|
| Street address |
Alsyllio Agrokepio, 1 Makedonias str
|
| City |
Chania |
| ZIP/Postal code |
73100 |
| Country |
Greece |
| |
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| Platforms (1) |
| GPL21525 |
[TomGene-1_1-st] Affymetrix Tomato Genome Array |
|
| Samples (9)
|
|
| Relations |
| BioProject |
PRJNA313357 |
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