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Series GSE84306 Query DataSets for GSE84306
Status Public on Jul 11, 2017
Title Comprehensive microRNA-sequencing of small extracellular vesicles derived from head and neck carcinoma cells reveals common secretion profiles
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Exosomes are nano-sized (40-150 nm), membrane encapsulated vesicles that are released by cells into the extracellular space and function as intercellular signaling vectors through the horizontal transfer of biologic molecules, including microRNA (miRNA). Although secreted by both normal and malignant cells, there is evidence that cancer-derived exosomes enable the tumor to manipulate its microenvironment, contributing to the capacity of the tumor for immune evasion, growth, invasion, and metastatic spread.
 
Overall design The purpose of this study was to apply miRNA-sequencing to exosomes isolated from conditioned culture media to comprehensively characterize miRNA secreted in exosomes from 4 distinct head and neck squamous cell carcinoma (HNSCC) cell lines and normal oral epithelial cells.
 
Contributor(s) Langevin SM, Medvedovic M
Citation(s) 29137278
Submission date Jul 12, 2016
Last update date May 15, 2019
Contact name Scott M Langevin
E-mail(s) langevst@uc.edu
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
 
Platforms (1)
GPL15433 Illumina HiSeq 1000 (Homo sapiens)
Samples (20)
GSM2231252 H413_1
GSM2231253 H413_2
GSM2231254 H413_3
Relations
BioProject PRJNA328779
SRA SRP078325

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84306_CountsTable_unnorm_RPKM.txt.gz 76.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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