NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE84336 Query DataSets for GSE84336
Status Public on Feb 09, 2017
Title Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [Toxin]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the response of Caco-2 cells to infection by C. concisus strains or exposure to C. concisuszonula occludens toxin
 
Overall design Identification of differential transcript expression following C. concisus infection or exposure to zonula occludens toxin.
Toxin dataset.
 
Contributor(s) Deshpande NP, Kaakoush NO
Citation(s) 27677841
Submission date Jul 13, 2016
Last update date May 15, 2019
Contact name Nandan P Deshpande
E-mail(s) n.deshpande@unsw.edu.au
Organization name Systems Biology Initiative
Department School of Biotechnology and Biological Sciences
Street address Kensington Campus
City Sydney
State/province NSW
ZIP/Postal code 20
Country Australia
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM2232079 ToxinSpecific_Untreated1
GSM2232080 ToxinSpecific_Untreated2
GSM2232081 ToxinSpecific_Untreated3
This SubSeries is part of SuperSeries:
GSE84338 Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells
Relations
BioProject PRJNA328934
SRA SRP078416

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84336_ToxinSpecific_count_matrix.txt.gz 524.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap