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Series GSE86395 Query DataSets for GSE86395
Status Public on Mar 01, 2017
Title A genome-wide study reveals a pathway for small RNA-mediated recognition of UV-induced DNA lesions (CPDs)
Organism Arabidopsis thaliana
Experiment type Other
Summary This study reports that the DNA DAMAGE-BINDING PROTEIN 2 (DDB2) and ARGONAUTE 1 (AGO1) form a chromatin-bound complex, which facilitates recognition of photo-lesions.
 
Overall design Immunoprecipitation of photolesions (CPDs) after UV exposure
 
Contributor(s) Molinier J
Citation(s) 28325872
Submission date Sep 02, 2016
Last update date May 15, 2019
Contact name Jean Molinier
E-mail(s) Jean.Molinier@ibmp-cnrs.unistra.fr
Phone +33 (0) 3 67 15 53 12
Organization name IBMP-CNRS
Street address 12 rue du General Zimmer
City Strasbourg
ZIP/Postal code 67084
Country France
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (7)
GSM2301527 WT input
GSM2301528 WT no UV rep1
GSM2301529 WT no UV rep2
This SubSeries is part of SuperSeries:
GSE86403 A genome-wide study reveals a pathway for small RNA-mediated recognition of UV-induced DNA lesions
Relations
BioProject PRJNA341681
SRA SRP084317

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86395_RAW.tar 60.0 Kb (http)(custom) TAR (of GFF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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