|
| Status |
Public on Oct 31, 2018 |
| Title |
RNA-Seq from early time points in the kidney differentiation protocol |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The kidney differentiation protocol takes induced pluripotent stem cells through to kidney organoid via directed differentiation in approximately 25 days. Initially the cells are grown in a monolayer in a dish before being pelleted on day seven. We have performed RNA sequencing on three replicates taken at two points before cells are pelleted: day 0, when they are still iPSCs, and day 4 when cells have been exposed to growth factors and have started differentiating.
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| |
|
| Overall design |
Gene expression profiling of six samples across two time points (Day 0 and Day 4)
|
| |
|
| Contributor(s) |
Phipson B |
| Citation(s) |
30573816 |
| Submission date |
Oct 19, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Belinda Phipson |
| Organization name |
WEHI
|
| Department |
Bioinformatics
|
| Lab |
Phipson
|
| Street address |
1G Royal Parade
|
| City |
Parkville |
| State/province |
VIC |
| ZIP/Postal code |
3052 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (6)
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|
| Relations |
| BioProject |
PRJNA349167 |
| SRA |
SRP091776 |
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