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| Status |
Public on Jun 16, 2017 |
| Title |
ZEB1 binding sites in TGF-beta-stimulated MDA-231-D and Hs578T basal type breast cancer cell lines [ChIP-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
We searched for roles of ZEB1 during EMT through genome-wide analysis of its binding sites in breast cancer cells.
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| Overall design |
ZEB1 binding sites in TGF-beta-stimulated MDA-231-D and Hs578T cells were determined by ChIP-seq.
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| Contributor(s) |
Katsura A, Tamura Y, Morikawa M, Sakurai T, Mizutani A, Morishita Y, Miyazono K, Koinuma D |
| Citation(s) |
28618162 |
| Submission date |
Oct 26, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Daizo Koinuma |
| E-mail(s) |
d-koinuma@umin.ac.jp
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| Organization name |
University of Tokyo
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| Department |
Pathology
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| Street address |
Hongo 7-3-1, Bunkyo-ku
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| City |
Tokyo |
| ZIP/Postal code |
113-0033 |
| Country |
Japan |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE89206 |
ZEB1-regulated inflammatory phenotype in breast cancer cells |
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| Relations |
| BioProject |
PRJNA350681 |
| SRA |
SRP092106 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE89203_RAW.tar |
1.3 Gb |
(http)(custom) |
TAR (of BED, BW) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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