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Series GSE89457 Query DataSets for GSE89457
Status Public on Mar 21, 2018
Title ChIP Seq with NKX2-5 antibody in human embryonic stem cells in cardiomyogenesis
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP Seq with NKX2-5 antibody in hESC's
 
Overall design Experiment involved the analysis of 3 ChIP Seq NKX2-5 replicates using 2 different antibodies (Abcam ab35842, Santa Cruz sc-14033) with IgG as a control (Sigma)
 
Contributor(s) Elliot D, Anderson D
Citation(s) 29636455
Submission date Nov 02, 2016
Last update date Aug 26, 2019
Contact name Katrina M Bell
E-mail(s) katrina.bell@mcri.edu.au
Phone 61399366709
Organization name MCRI
Street address RCH, Flemington Rd, Parkville
City Melbourne
State/province Victoria
ZIP/Postal code 3052
Country Australia
 
Platforms (1)
GPL15433 Illumina HiSeq 1000 (Homo sapiens)
Samples (5)
GSM2372592 ChiP1_Ab.fastq
GSM2372593 ChiP3_Ab.fastq
GSM2372594 ChiP2_Sc.fastq
Relations
BioProject PRJNA352255
SRA SRP092473

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89457_Consensus_peaks.bed.gz 76.7 Kb (ftp)(http) BED
GSE89457_RAW.tar 610.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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