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GEO accession:
Series GSE90686
Query DataSets for GSE90686
Status
Public on Mar 15, 2018
Title
Recognition of RNA N6-methyadenosine by IGF2BP proteins Enhances mRNA Stability
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29476152
Submission date
Nov 30, 2016
Last update date
May 15, 2019
Contact name
Jianjun Chen
E-mail(s)
jianchen@coh.org
Phone
6262185591
Organization name
Beckman Research Institute of City of Hope
Department
Systems Biology
Lab
Chen Lab
Street address
1218 S. 5th Ave., Room 2062
City
Monrovia
State/province
CA
ZIP/Postal code
91016
Country
USA
Platforms (1)
GPL15433
Illumina HiSeq 1000 (Homo sapiens)
Samples (44)
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GSM2409780
IGF2BP1-Input
GSM2409781
IGF2BP1-IP
GSM2409782
IGF2BP2-Input
GSM2409783
IGF2BP2-IP
GSM2409784
IGF2BP3-Input
GSM2409785
IGF2BP3-IP
GSM2409802
HepG2_RNA_seq_shCont_input
GSM2409803
HepG2_RNA_seq_shCont_IP
GSM2409804
HepG2_RNA_seq_shMETTL14_input
GSM2409805
HepG2_RNA_seq_shMETTL14_IP
GSM2410384
HepG2_shNS_0h_rep1 (RNA-seq_rep1)
GSM2410385
HepG2_shNS_0h_rep2 (RNA-seq_rep2)
GSM2410386
HepG2_shNS_1h_rep1
GSM2410387
HepG2_shNS_1h_rep2
GSM2410388
HepG2_shNS_3h_rep1
GSM2410389
HepG2_shNS_3h_rep2
GSM2410390
HepG2_shNS_6h_rep1
GSM2410391
HepG2_shNS_6h_rep2
GSM2410392
HepG2_shIGF2BP1_0h_rep1 (RNA-seq_rep1)
GSM2410393
HepG2_shIGF2BP1_0h_rep2 (RNA-seq_rep2)
GSM2410394
HepG2_shIGF2BP1_1h_rep1
GSM2410395
HepG2_shIGF2BP1_1h_rep2
GSM2410396
HepG2_shIGF2BP1_3h_rep1
GSM2410397
HepG2_shIGF2BP1_3h_rep2
GSM2410398
HepG2_shIGF2BP1_6h_rep1
GSM2410399
HepG2_shIGF2BP1_6h_rep2
GSM2410400
HepG2_shIGF2BP3_0h_rep1 (RNA-seq_rep1)
GSM2410401
HepG2_shIGF2BP3_0h_rep2 (RNA-seq_rep2)
GSM2410402
HepG2_shIGF2BP3_1h_rep1
GSM2410403
HepG2_shIGF2BP3_1h_rep2
GSM2410404
HepG2_shIGF2BP3_3h_rep1
GSM2410405
HepG2_shIGF2BP3_3h_rep2
GSM2410406
HepG2_shIGF2BP3_6h_rep1
GSM2410407
HepG2_shIGF2BP3_6h_rep2
GSM2410408
HepG2_shNS_RNA-seq_rep3
GSM2410409
HepG2_shIGF2BP1_RNA-seq_rep3
GSM2410410
HepG2_shIGF2BP2_RNA-seq_rep1
GSM2410411
HepG2_shIGF2BP2_RNA-seq_rep2
GSM2410412
HepG2_shIGF2BP2_RNA-seq_rep3
GSM2410413
HepG2_shIGF2BP3_RNA-seq_rep3
GSM2715523
HepG2_RNA_seq_shCont_input_rep2
GSM2715524
HepG2_RNA_seq_shCont_IP_rep2
GSM2715525
HepG2_RNA_seq_shMETTL14_input_rep2
GSM2715526
HepG2_RNA_seq_shMETTL14_IP_rep2
This SuperSeries is composed of the following SubSeries:
GSE90639
Transcriptome-wide identification of IGF2BP binding RNAs by RIP-seq.
GSE90642
Profiling of N6-Adenosine (m6A) Methylation in HepG2 cells
GSE90684
IGF2BP proteins Enhance mRNA stability
Relations
BioProject
PRJNA355382
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Supplementary data files not provided
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