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Series GSE98176 Query DataSets for GSE98176
Status Public on Feb 13, 2018
Title RNA-Seq of epidermis and mesophyll in arabidopsis developing embryos
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary ngs2014_01_microd-ngs micro d-1-RNA seq of epidermis and mesophyll in arabidopsis developing embryos-comparison of transcript accumulation in epidermis and mesophyll in Total RNA extracted by laser assisted microdissection from developping embryos at late heart stage.
 
Overall design 8 samples with 4 biological replicats. organ comparison
Web link http://tools.ips2.u-psud.fr/CATdb
 
Contributor(s) Dubreucq B, Taconnat L, Balzergue S
Citation(s) 29434651
Submission date Apr 25, 2017
Last update date Jul 25, 2021
Contact name VĂ©ronique BRUNAUD
E-mail(s) veronique.brunaud@inrae.fr
Organization name INRA - CNRS - UPSUD
Lab IPS2
Street address rue Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (8)
GSM2588913 epiderm_col0_1
GSM2588914 epiderm_col0_2
GSM2588915 epiderm_col0_3
Relations
BioProject PRJNA384192
SRA SRP105190

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98176_RAW.tar 2.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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