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Series GSE98273 Query DataSets for GSE98273
Status Public on Jun 16, 2017
Title RNA-sequencing in MDA-231-D cells transfected with ZEB1 or ZEB2 siRNAs
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We searched for roles of ZEB1and/or ZEB2 during EMT by RNA-seq in breast cancer cells.
 
Overall design Expression of mRNA in a basal type breast cancer cell line MDA-231-D transfected with ZEB1 or ZEB2 siRNAs.
 
Contributor(s) Katsura A, Tamura Y, Morikawa M, Sakurai T, Mizutani A, Morishita Y, Miyazono K, Koinuma D
Citation(s) 28618162
Submission date Apr 27, 2017
Last update date May 15, 2019
Contact name Daizo Koinuma
E-mail(s) d-koinuma@umin.ac.jp
Organization name University of Tokyo
Department Pathology
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (5)
GSM2590110 RNA-seq siNC, si Negative control
GSM2590111 RNA-seq, si ZEB1-1
GSM2590112 RNA-seq, si ZEB1-2
This SubSeries is part of SuperSeries:
GSE89206 ZEB1-regulated inflammatory phenotype in breast cancer cells
Relations
BioProject PRJNA384523
SRA SRP105333

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98273_genes.fpkm_tracking.txt.gz 1.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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