|
| Status |
Public on Feb 13, 2018 |
| Title |
Effect of dilution on RNA seq sensitivity |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
ngs2012_02_microd-ngs microd-part2-Effect of dilution on RNA seq sensitivity-One sample of total RNA extracted from whole embryo by laser assisted microdissection was diluted from 5ng to 10pg to check sensitivity of the library construction and subsequent sensitivity of transcript identification by RNA seq.
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| |
|
| Overall design |
6 samples with biological replicats. null
|
| Web link |
http://tools.ips2.u-psud.fr/CATdb
|
| |
|
| Contributor(s) |
Dubreucq B, Taconnat L, Balzergue S |
| Citation(s) |
29434651 |
| Submission date |
Apr 27, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Véronique BRUNAUD |
| E-mail(s) |
veronique.brunaud@inrae.fr
|
| Organization name |
INRA - CNRS - UPSUD
|
| Lab |
IPS2
|
| Street address |
rue Noetzlin
|
| City |
Gif-sur-Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA384654 |
| SRA |
SRP105371 |
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