|
| Status |
Public on Mar 27, 2015 |
| Title |
Bladder cancer_primary 3 |
| Sample type |
RNA |
| |
|
| Source name |
Bladder tumor
|
| Organism |
Mus musculus |
| Characteristics |
pathological stage: T2N0M0
tissue: Bladder cancer primary
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted using the High Pure RNA Paraffin Kit from Roche (Indianapolis, IN).
|
| Label |
biotin
|
| Label protocol |
RNA was amplified, fragmented and biotinylated using the Ovation FFPE system v 3.0 (NuGEN)
|
| |
|
| Hybridization protocol |
Samples were hybridized using Affymetrix hybridization kit materials and protocols
|
| Scan protocol |
Affymetrix Gene ChIP Scanner 3000 7G
|
| Description |
NA
|
| Data processing |
Data were processed using SCAN software package (Bioconductor)
HuEx-1_0-st-v1.r2.pgf
|
| |
|
| Submission date |
Mar 26, 2015 |
| Last update date |
Mar 27, 2015 |
| Contact name |
Mohammed Alshalalfa |
| E-mail(s) |
mohamed@genomedx.com
|
| Organization name |
GenomeDx
|
| Street address |
water st
|
| City |
vancouver |
| State/province |
bc |
| ZIP/Postal code |
V6B 1B8 |
| Country |
Canada |
| |
|
| Platform ID |
GPL5188 |
| Series (1) |
| GSE67312 |
Patient-derived primary xenografts in the preclinical development of novel targeted therapies for bladder cancer |
|
