|
| Status |
Public on Mar 21, 2016 |
| Title |
Sample tb8926, placenta, fetal side |
| Sample type |
genomic |
| |
|
| Source name |
Normal placenta, fetal side
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Placenta, fetal side
disease state: Normal
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA samples were isolated using Phenol-chloroform extraction protocol.
|
| Label |
Cy3,Cy5
|
| Label protocol |
According to manufacturers instructions.
|
| |
|
| Hybridization protocol |
Genomic DNA was hybridized according to manufacturers instructions.
|
| Scan protocol |
Arrays were imaged using Illumina iScan according to manufacturer's specifications (Illumina Inc.).
|
| Description |
Methylation data using Illumina 450K BeadChips are available for this sample
|
| Data processing |
Data was extracted using GenomeStudio v2011.1 Genotyping Module (v1.9.4). All probes mapping to the X or Y chromosome were removed.
|
| |
|
| Submission date |
Mar 15, 2016 |
| Last update date |
Mar 21, 2016 |
| Contact name |
Benjamin Tycko |
| E-mail(s) |
bejamintycko@hackensackmeridian.org
|
| Phone |
5519963595
|
| Organization name |
HUMC
|
| Department |
Epigenetics
|
| Street address |
40 prospect avenue
|
| City |
hackensack |
| State/province |
NJ |
| ZIP/Postal code |
07601 |
| Country |
USA |
| |
|
| Platform ID |
GPL18952 |
| Series (2) |
| GSE79254 |
Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation: genotyping data for the identification of mQTL |
| GSE79262 |
Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation |
|
