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Sample GSM213734 Query DataSets for GSM213734
Status Public on Dec 31, 2007
Title Day7B_Cy3_XY
Sample type genomic
 
Source name male reference DNA
Organism Homo sapiens
Characteristics Pooled DNA from the blood of 18 normal individuals
Extracted molecule genomic DNA
Extraction protocol DNAzol (Invitrogen) according to manufacturer's protocol
Label Cy3
Label protocol DNA labeling protocol according to Enzo Life Sciences
 
Hybridization protocol Hybridization protocol available via www.agilent.com
Scan protocol Slides were scanned using the Agilent microarray scanner, protocol according to Agilent.
Description protocols according to manufacturer (Enzo Life Scienceswww.agilent.com)
Data processing Median Signal intensity minus median Background intensity; excluding negative values
 
Submission date Jul 30, 2007
Last update date Jul 31, 2007
Contact name Daoud Sie
E-mail(s) d.sie@vumc.nl
Phone +31 20 4442428
Organization name Vrije Universiteit Medical Center
Department Pathology
Lab Microarray Core Facility
Street address De Boelelaan 1117
City Amsterdam
ZIP/Postal code 1081 HV
Country Netherlands
 
Platform ID GPL5477
Series (1)
GSE8628 Across array comparative genomic hybridization

Data table header descriptions
ID_REF
gMedianSignal median signal intensity channel 1
gBGMedianSignal median background intensity channel 1
VALUE median signal intensity channel 1 minus median background intensity channel 1, excluding negative values

Data table
ID_REF gMedianSignal gBGMedianSignal VALUE
1 2429 53
2 58 52
3 56 51
4 56 51
5 51 51
6 85.5 53
7 133 63
8 247 70
9 318.5 78
10 891 93.5
11 370 100
12 576 110 466
13 1083 114 969
14 1801 113.5 1687.5
15 658 104 554
16 788 89.5 698.5
17 706.5 74 632.5
18 451.5 68.5 383
19 356.5 70 286.5
20 422.5 71.5 351

Total number of rows: 45220

Table truncated, full table size 810 Kbytes.




Supplementary data files not provided
Processed data are available on Series record

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