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Status
Public on Dec 31, 2007
Title
Agilent-014950 Human Genome CGH Microarray 4x44K (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Transfer of the Human Genome CGH Microarray 44B to the 4x44K format
Submission date
Jul 09, 2007
Last update date
Dec 06, 2012
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (812)
GSM211187 , GSM213731 , GSM213734 , GSM213737 , GSM213738 , GSM213740
GSM213741 ,
GSM213742 ,
GSM213743 ,
GSM213745 ,
GSM322176 ,
GSM322179 ,
GSM322566 ,
GSM322567 ,
GSM322569 ,
GSM322571 ,
GSM322573 ,
GSM322574 ,
GSM324777 ,
GSM324920 ,
GSM324923 ,
GSM352397 ,
GSM353502 ,
GSM353512 ,
GSM353514 ,
GSM353575 ,
GSM353576 ,
GSM353577 ,
GSM353597 ,
GSM353598 ,
GSM353599 ,
GSM353600 ,
GSM353979 ,
GSM353980 ,
GSM353981 ,
GSM353982 ,
GSM353985 ,
GSM353986 ,
GSM353987 ,
GSM353988 ,
GSM353989 ,
GSM353990 ,
GSM353993 ,
GSM353996 ,
GSM353997 ,
GSM353998 ,
GSM353999 ,
GSM354001 ,
GSM354002 ,
GSM354003 ,
GSM354007 ,
GSM354008 ,
GSM452366 ,
GSM452367 ,
GSM452368 ,
GSM452369 ,
GSM452370 ,
GSM452371 ,
GSM452372 ,
GSM452373 ,
GSM452374 ,
GSM452375 ,
GSM452376 ,
GSM452377 ,
GSM452378 ,
GSM452379 ,
GSM452380 ,
GSM452381 ,
GSM452382 ,
GSM452383 ,
GSM452384 ,
GSM452385 ,
GSM452386 ,
GSM452387 ,
GSM452388 ,
GSM452389 ,
GSM452390 ,
GSM452391 ,
GSM452392 ,
GSM452393 ,
GSM452725 ,
GSM452756 ,
GSM453572 ,
GSM503023 ,
GSM503030 ,
GSM503032 ,
GSM503037 ,
GSM503039 ,
GSM503040 ,
GSM503042 ,
GSM503149 ,
GSM503256 ,
GSM503257 ,
GSM545496 ,
GSM545497 ,
GSM545498 ,
GSM545499 ,
GSM561176 ,
GSM561177 ,
GSM561178 ,
GSM561179 ,
GSM561180 ,
GSM561181 ,
GSM561182 ,
GSM561183 ,
GSM561184 ,
GSM561185 ,
GSM561186 ,
GSM561187 ,
GSM561188 ,
GSM561189 ,
GSM561190 ,
GSM561191 ,
GSM561192 ,
GSM561193 ,
GSM561194 ,
GSM561195 ,
GSM562224 ,
GSM562225 ,
GSM562226 ,
GSM562227 ,
GSM589214 ,
GSM589215 ,
GSM589216 ,
GSM589217 ,
GSM589218 ,
GSM589219 ,
GSM589220 ,
GSM589221 ,
GSM589222 ,
GSM589223 ,
GSM590060 ,
GSM590061 ,
GSM590062 ,
GSM590063 ,
GSM590064 ,
GSM590065 ,
GSM590066 ,
GSM590067 ,
GSM590068 ,
GSM590069 ,
GSM590070 ,
GSM590071 ,
GSM590072 ,
GSM590073 ,
GSM590074 ,
GSM590075 ,
GSM590076 ,
GSM590077 ,
GSM590078 ,
GSM590079 ,
GSM590080 ,
GSM590081 ,
GSM590082 ,
GSM590083 ,
GSM590084 ,
GSM590085 ,
GSM590086 ,
GSM590087 ,
GSM590088 ,
GSM590089 ,
GSM590090 ,
GSM590091 ,
GSM590092 ,
GSM590093 ,
GSM590094 ,
GSM590095 ,
GSM590096 ,
GSM590097 ,
GSM590098 ,
GSM602527 ,
GSM602528 ,
GSM602529 ,
GSM602530 ,
GSM602531 ,
GSM602532 ,
GSM602533 ,
GSM602534 ,
GSM602535 ,
GSM602536 ,
GSM602537 ,
GSM602538 ,
GSM602539 ,
GSM602540 ,
GSM606474 ,
GSM606506 ,
GSM606512 ,
GSM606520 ,
GSM606530 ,
GSM606532 ,
GSM606533 ,
GSM606547 ,
GSM606552 ,
GSM606555 ,
GSM606557 ,
GSM606559 ,
GSM606571 ,
GSM606577 ,
GSM606582 ,
GSM606585 ,
GSM634089 ,
GSM634090 ,
GSM634091 ,
GSM634092 ,
GSM634093 ,
GSM634094 ,
GSM634095 ,
GSM634097 ,
GSM634098 ,
GSM634099 ,
GSM634100 ,
GSM634101 ,
GSM634102 ,
GSM634103 ,
GSM634104 ,
GSM634105 ,
GSM634106 ,
GSM634118 ,
GSM634119 ,
GSM634120 ,
GSM634121 ,
GSM634122 ,
GSM634123 ,
GSM634124 ,
GSM634125 ,
GSM634126 ,
GSM634127 ,
GSM634128 ,
GSM634129 ,
GSM634130 ,
GSM634131 ,
GSM634132 ,
GSM634134 ,
GSM634135 ,
GSM634136 ,
GSM634137 ,
GSM634138 ,
GSM634139 ,
GSM634140 ,
GSM634141 ,
GSM634142 ,
GSM634143 ,
GSM634165 ,
GSM634166 ,
GSM634169 ,
GSM634170 ,
GSM634172 ,
GSM634173 ,
GSM634174 ,
GSM634175 ,
GSM634176 ,
GSM634177 ,
GSM634178 ,
GSM634179 ,
GSM634180 ,
GSM634181 ,
GSM634182 ,
GSM634183 ,
GSM634184 ,
GSM634185 ,
GSM634186 ,
GSM634187 ,
GSM634188 ,
GSM634190 ,
GSM707793 ,
GSM707794 ,
GSM707795 ,
GSM707796 ,
GSM707797 ,
GSM707798 ,
GSM707799 ,
GSM707800 ,
GSM707801 ,
GSM707802 ,
GSM707803 ,
GSM707804 ,
GSM707805 ,
GSM707806 ,
GSM707807 ,
GSM707808 ,
GSM707809 ,
GSM707810 ,
GSM707811 ,
GSM707812 ,
GSM707813 ,
GSM707814 ,
GSM707815 ,
GSM707816 ,
GSM707817 ,
GSM707818 ,
GSM707819 ,
GSM707820 ,
GSM707821 ,
GSM707822 ,
GSM707823 ,
GSM707824 ,
GSM707825 ,
GSM707826 ,
GSM707827 ,
GSM707828 ,
GSM707829 ,
GSM707830 ,
GSM707831 ,
GSM707832 ,
GSM707833 ,
GSM707834 ,
GSM707835 ,
GSM707836 ,
GSM707837 ,
GSM707838 ,
GSM707839 ,
GSM707840 ,
GSM707841 ,
GSM707842 ,
GSM707843 ,
GSM707844 ,
GSM707845 ,
GSM707846 ,
GSM707847 ,
GSM707848 ,
GSM707849 ,
GSM707850 ,
GSM707851 ,
GSM707852 ,
GSM707853 ,
GSM707854 ,
GSM707855 ,
GSM707856 ,
GSM707857 ,
GSM707858 ,
GSM707859 ,
GSM707860 ,
GSM707861 ,
GSM707862 ,
GSM707863 ,
GSM707864 ,
GSM707865 ,
GSM707866 ,
GSM707867 ,
GSM707868 ,
GSM707869 ,
GSM707870 ,
GSM707871 ,
GSM722765 ,
GSM722766 ,
GSM722767 ,
GSM722768 ,
GSM722769 ,
GSM722770 ,
GSM722771 ,
GSM722772 ,
GSM722773 ,
GSM722774 ,
GSM722775 ,
GSM722776 ,
GSM722777 ,
GSM722778 ,
GSM722779 ,
GSM722780 ,
GSM722781 ,
GSM722782 ,
GSM722783 ,
GSM722784 ,
GSM722785 ,
GSM722786 ,
GSM722787 ,
GSM722788 ,
GSM722789 ,
GSM722790 ,
GSM722791 ,
GSM722792 ,
GSM722793 ,
GSM722794 ,
GSM722795 ,
GSM722796 ,
GSM722797 ,
GSM722798 ,
GSM722799 ,
GSM722800 ,
GSM722801 ,
GSM722802 ,
GSM722803 ,
GSM722804 ,
GSM722805 ,
GSM722806 ,
GSM722807 ,
GSM722808 ,
GSM722809 ,
GSM722810 ,
GSM722811 ,
GSM722812 ,
GSM722813 ,
GSM722814 ,
GSM722815 ,
GSM722816 ,
GSM722817 ,
GSM722818 ,
GSM722819 ,
GSM722820 ,
GSM722821 ,
GSM722822 ,
GSM722823 ,
GSM722824 ,
GSM722825 ,
GSM722826 ,
GSM722827 ,
GSM722828 ,
GSM722829 ,
GSM722830 ,
GSM722831 ,
GSM722832 ,
GSM722833 ,
GSM722834 ,
GSM722835 ,
GSM722836 ,
GSM722837 ,
GSM722838 ,
GSM722839 ,
GSM722840 ,
GSM722841 ,
GSM722842 ,
GSM722843 ,
GSM722844 ,
GSM722845 ,
GSM722846 ,
GSM722847 ,
GSM722848 ,
GSM722849 ,
GSM722850 ,
GSM763023 ,
GSM763024 ,
GSM763025 ,
GSM763026 ,
GSM838283 ,
GSM838284 ,
GSM838285 ,
GSM838286 ,
GSM838287 ,
GSM838288 ,
GSM838289 ,
GSM838290 ,
GSM838291 ,
GSM838292 ,
GSM838293 ,
GSM838294 ,
GSM838295 ,
GSM838296 ,
GSM838297 ,
GSM838298 ,
GSM838299 ,
GSM838300 ,
GSM838301 ,
GSM838302 ,
GSM838303 ,
GSM838304 ,
GSM838305 ,
GSM838306 ,
GSM838307 ,
GSM838308 ,
GSM838309 ,
GSM838310 ,
GSM838311 ,
GSM838312 ,
GSM838313 ,
GSM838314 ,
GSM838315 ,
GSM838316 ,
GSM838317 ,
GSM838318 ,
GSM838319 ,
GSM838320 ,
GSM838321 ,
GSM838322 ,
GSM838323 ,
GSM838324 ,
GSM838325 ,
GSM838326 ,
GSM838327 ,
GSM838328 ,
GSM838329 ,
GSM838330 ,
GSM838331 ,
GSM838332 ,
GSM838333 ,
GSM878070 ,
GSM878073 ,
GSM878074 ,
GSM878075 ,
GSM878076 ,
GSM878077 ,
GSM878078 ,
GSM878079 ,
GSM878080 ,
GSM878081 ,
GSM878082 ,
GSM878083 ,
GSM881391 ,
GSM881392 ,
GSM881393 ,
GSM881394 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (38)
GSE8628 Across array comparative genomic hybridization
GSE11573 Chromosomal signatures of a subset of high-grade premalignant cervical lesions closely resemble invasive carcinomas
GSE12928 NMD inhibition fails to identify tumour suppressor genes in microsatellite stable gastric cancer cell lines
GSE12951 Chromosomal aberrations in benign and malignant salivary gland myoepitheliomas
GSE12958 CGH analysis of two components of carcinosarcoma
GSE14109 Oligonucleotide array CGH in high-risk neuroblastoma tumors
GSE18098 Genetic characterization of tumor-stage mycosis fungoides
GSE18137 Resistance to TFT by decreased TK or overexpression of sPLA2
GSE20144 aCGH profiles of parental and oxaliplatin resistant colorectal cancer and ovarian cancer cell lines
GSE21923 Genomic profiling of HL60 and U266 blood cancer cell lines
GSE22635 Genetic and epigenetic characteristics of human multiple hepatocellular carcinoma
GSE22673 Susceptibility of neoplastic transformation of human dental pulp stem cells DPSC in hypoxia
GSE23891 Gene copy number variation in male breast cancer by aCGH
GSE23946 Identification of copy number alterations by array comparative genomic hybridization in patients with late chronic or accelerated phase chronic myeloid leukemia treated with imatinib mesylate
GSE24452 Genetic abnormalities in various cell subpopulations of GBM brain tumors
GSE24558 GBM brain tumors
GSE24602 Comprehensive array CGH of normal karyotype Myelodysplastic syndrome reveals hidden recurrent and individual genomic copy number aberrations with prognostic relevance
GSE25771 High-resolution, genome-wide analysis of human metastatic neuroblastoma samples by array-Comparative Genomic Hybridization (aCGH)
GSE28601 Genomic profiling of renal cell carcinoma in patients with end-stage renal disease
GSE29227 aCGH profiling of prostate tumors
GSE29229 Identification of the tumor suppressor gene at chromosome 5q21
GSE30754 Genomic Characterization of Bladder Cancer Cell Lines using CGH Arrays
GSE33881 Genomic characterization of the MPNST
GSE35953 High-resolution, genome-wide analysis of human metastatic neuroblastoma samples by array-Comparative Genomic Hybridization (aCGH)
GSE36115 Genomic copy number alterations in human esophageal squamous cell carcinoma (ESCC) cell lines
GSE36942 Genomic profiling of oral squamous cell carcinoma by array-based comparative genomic hybridization
GSE41813 Colorectal tumor DNA vs. normal control DNA
GSE43027 An integrative genomic and transcriptomic analysis reveals potential targets associated with cell proliferation in Uterine Leiomyomas
GSE52250 Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21 [CGH]
GSE52251 Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21
GSE73513 Whole genome amplification effect on segmental copy-number changes and copy-number neutral loss of heterozygosity analysis by oligonucleotide-based array-comparative genome hybridization
GSE108098 Extent and Patterns of MGMT Promoter Methylation in Glioblastoma- and Respective Glioblastoma-Derived Spheres
GSE131274 CGH profiling of Normal male/female DNA and colorectal cancer cell lines
GSE145338 19p loss is significantly enriched in older age neuroblastoma patients and correlates with poor prognosis (Agilent-014950)
GSE145341 19p loss is significantly enriched in older age neuroblastoma patients and correlates with poor prognosis
GSE153314 SMAD4 haploinsufficiency in small intestinal neuroendocrine tumors
GSE154540 CDK4 overexpression is a predictive biomarker for resistance to conventional chemotherapy in osteosarcoma patients
GSE254936 Proteogenomic analysis reveals adaptive strategies to alleviate the consequences of aneuploidy in cancer
Relations Alternative to
GPL8841
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GB_ACC GenBankAccession
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
Data table ID COL ROW SPOT_ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION 1
266
170
HsCGHBrightCorner
pos
2
266
168
DarkCorner
pos
3
266
166
DarkCorner
pos
4
266
164
DarkCorner
pos
5
266
162
DarkCorner
pos
6
266
160
DarkCorner
pos
7
266
158
DarkCorner
pos
8
266
156
DarkCorner
pos
9
266
154
DarkCorner
pos
10
266
152
DarkCorner
pos
11
266
150
DarkCorner
pos
12
266
148
A_14_P103951
FALSE
NM_002309
LIF
leukemia inhibitory factor (cholinergic differentiation factor)
ref|NM_002309
chr22:30636424-30636483
hs|q12.2
Homo sapiens leukemia inhibitory factor (cholinergic differentiation factor) (LIF), mRNA.
13
266
146
A_14_P119736
FALSE
chr9:29918743-29918802
hs|p21.1
14
266
144
A_14_P115660
FALSE
NM_030806
C1orf21
chromosome 1 open reading frame 21
ref|NM_030806
chr1:184512851-184512910
hs|q25.3
Homo sapiens chromosome 1 open reading frame 21 (C1orf21), mRNA.
15
266
142
A_14_P108941
FALSE
NM_001080427
THSD7B
thrombospondin, type I, domain containing 7B
ref|NM_001080427
chr2:138289498-138289557
hs|q22.1
Homo sapiens thrombospondin, type I, domain containing 7B (THSD7B), mRNA.
16
266
140
A_14_P134363
FALSE
ens|ENST00000453016|ens|ENST00000418770
chr2:160537539-160537598
hs|q24.2
17
266
138
A_14_P102642
FALSE
ens|ENST00000419912
chr2:242815920-242815972
hs|q37.3
18
266
136
A_14_P107617
FALSE
NM_016570
ERGIC2
ERGIC and golgi 2
ref|NM_016570
chr12:29493879-29493938
hs|p11.22
Homo sapiens ERGIC and golgi 2 (ERGIC2), mRNA.
19
266
134
A_14_P136014
FALSE
NM_018593
SLC16A10
solute carrier family 16, member 10 (aromatic amino acid transporter)
ref|NM_018593
chr6:111426241-111426300
hs|q21
Homo sapiens solute carrier family 16, member 10 (aromatic amino acid transporter) (SLC16A10), mRNA.
20
266
132
A_14_P115925
FALSE
NM_001146
ANGPT1
angiopoietin 1
ref|NM_001146
chr8:108348371-108348430
hs|q23.1
Homo sapiens angiopoietin 1 (ANGPT1), mRNA.
45220 8193 Kbytes .Supplementary data files not provided
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