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Sample GSM213741 Query DataSets for GSM213741
Status Public on Dec 31, 2007
Title Day7D_Cy5_XY
Sample type genomic
 
Source name male reference DNA
Organism Homo sapiens
Characteristics Pooled DNA from the blood of 18 normal individuals
Extracted molecule genomic DNA
Extraction protocol DNAzol (Invitrogen) according to manufacturer's protocol
Label Cy5
Label protocol DNA labeling protocol according to Enzo Life Sciences
 
Hybridization protocol Hybridization protocol available via www.agilent.com
Scan protocol Slides were scanned using the Agilent microarray scanner, protocol according to Agilent.
Description protocols according to manufacturer (Enzo Life Scienceswww.agilent.com)
Data processing Median Signal intensity minus median Background intensity; excluding negative values
 
Submission date Jul 30, 2007
Last update date Jul 31, 2007
Contact name Daoud Sie
E-mail(s) d.sie@vumc.nl
Phone +31 20 4442428
Organization name Vrije Universiteit Medical Center
Department Pathology
Lab Microarray Core Facility
Street address De Boelelaan 1117
City Amsterdam
ZIP/Postal code 1081 HV
Country Netherlands
 
Platform ID GPL5477
Series (1)
GSE8628 Across array comparative genomic hybridization

Data table header descriptions
ID_REF
rMedianSignal median signal intensity channel 1
rBGMedianSignal median background intensity channel 1
VALUE median signal intensity channel 1 minus median background intensity channel 1, excluding negative values

Data table
ID_REF rMedianSignal rBGMedianSignal VALUE
1 6313.5 87
2 96.5 87
3 88 89
4 97 88
5 87.5 87
6 100 89
7 99.5 88
8 97.5 89
9 94.5 89
10 91.5 89
11 98 88
12 597 86 511
13 1753.5 88 1665.5
14 3627 89 3538
15 808.5 90 718.5
16 1474 85 1389
17 1560 87 1473
18 694 89 605
19 510.5 88 422.5
20 742 87 655

Total number of rows: 45219

Table truncated, full table size 844 Kbytes.




Supplementary data files not provided
Processed data are available on Series record

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