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Sample GSM325137 Query DataSets for GSM325137
Status Public on Nov 04, 2009
Title Nova2 KO cortex 1
Sample type RNA
 
Source name mouse Nova2 knockout cortex
Organism Mus musculus
Characteristics strain: CD1
tissue: P10 cortex
Extracted molecule total RNA
Extraction protocol Trizol Extraction
Label TdT (Affymetrix WT Sense Target Labeling Assay)
Label protocol Affymetrix WT Sense Target Labeling Assay
 
Hybridization protocol Affymetrix WT Sense Target Labeling Assay
Scan protocol The scanning and image acquisition was done using Affymetrix GeneChip Operating Software (GCOS) v1.4. The scanner model is GeneChip Scanner 3000 7G.
Description mouse Nova2 knockout cortex
Data processing ArrayAssist (Stratagene); PLIER extended-antigenomic; DABG (p<0.05)
 
Submission date Sep 29, 2008
Last update date Nov 03, 2009
Contact name Donny D Licatalosi
Organization name Case Western Reserve University
Lab Licatalosi
Street address 10900 Euclid Ave
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL6193
Series (2)
GSE12965 Wild type vs. Nova2 KO mouse P10 cortex RNA
GSE17374 Wild type vs. Nova2 KO mouse: Exon array data

Data table header descriptions
ID_REF
VALUE Probeset signal values from ArrayAssist software

Data table
ID_REF VALUE
4304969 9.512606
4304973 8.182534
4305019 5.182931
4305053 6.784221
4305096 5.182579
4305160 8.9280405
4305182 5.524581
4305192 9.268937
4305210 8.050552
4305223 8.139146
4305251 4.3426113
4305305 7.981427
4305310 5.422677
4305333 9.626892
4305357 9.736149
4305397 6.317278
4305443 11.9108305
4305486 8.316083
4305534 4.6775327
4305570 8.009658

Total number of rows: 391597

Table truncated, full table size 6647 Kbytes.




Supplementary file Size Download File type/resource
GSM325137.CEL.gz 39.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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