NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM325138 Query DataSets for GSM325138
Status Public on Nov 04, 2009
Title Nova2 KO cortex 2
Sample type RNA
 
Source name mouse Nova2 knockout cortex
Organism Mus musculus
Characteristics strain: CD1
tissue: P10 cortex
Extracted molecule total RNA
Extraction protocol Trizol Extraction
Label TdT (Affymetrix WT Sense Target Labeling Assay)
Label protocol Affymetrix WT Sense Target Labeling Assay
 
Hybridization protocol Affymetrix WT Sense Target Labeling Assay
Scan protocol The scanning and image acquisition was done using Affymetrix GeneChip Operating Software (GCOS) v1.4. The scanner model is GeneChip Scanner 3000 7G.
Description mouse Nova2 knockout cortex
Data processing ArrayAssist (Stratagene); PLIER extended-antigenomic; DABG (p<0.05)
 
Submission date Sep 29, 2008
Last update date Nov 03, 2009
Contact name Donny D Licatalosi
Organization name Case Western Reserve University
Lab Licatalosi
Street address 10900 Euclid Ave
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL6193
Series (2)
GSE12965 Wild type vs. Nova2 KO mouse P10 cortex RNA
GSE17374 Wild type vs. Nova2 KO mouse: Exon array data

Data table header descriptions
ID_REF
VALUE Probeset signal values from ArrayAssist software

Data table
ID_REF VALUE
4304969 9.443176
4304973 8.802493
4305019 5.7587457
4305053 7.3578553
4305096 5.4923363
4305160 8.749391
4305182 5.6358905
4305192 8.981502
4305210 7.753767
4305223 7.7384777
4305251 4.6521497
4305305 8.022095
4305310 5.8302283
4305333 9.404717
4305357 10.326023
4305397 6.082949
4305443 11.900692
4305486 8.680135
4305534 5.0233088
4305570 8.021191

Total number of rows: 391597

Table truncated, full table size 6644 Kbytes.




Supplementary file Size Download File type/resource
GSM325138.CEL.gz 39.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap