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Sample GSM325139 Query DataSets for GSM325139
Status Public on Nov 04, 2009
Title Nova2 KO cortex 3
Sample type RNA
 
Source name mouse Nova2 knockout cortex
Organism Mus musculus
Characteristics strain: CD1
tissue: P10 cortex
Extracted molecule total RNA
Extraction protocol Trizol Extraction
Label TdT (Affymetrix WT Sense Target Labeling Assay)
Label protocol Affymetrix WT Sense Target Labeling Assay
 
Hybridization protocol Affymetrix WT Sense Target Labeling Assay
Scan protocol The scanning and image acquisition was done using Affymetrix GeneChip Operating Software (GCOS) v1.4. The scanner model is GeneChip Scanner 3000 7G.
Description mouse Nova2 knockout cortex
Data processing ArrayAssist (Stratagene); PLIER extended-antigenomic; DABG (p<0.05)
 
Submission date Sep 29, 2008
Last update date Nov 03, 2009
Contact name Donny D Licatalosi
Organization name Case Western Reserve University
Lab Licatalosi
Street address 10900 Euclid Ave
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL6193
Series (2)
GSE12965 Wild type vs. Nova2 KO mouse P10 cortex RNA
GSE17374 Wild type vs. Nova2 KO mouse: Exon array data

Data table header descriptions
ID_REF
VALUE Probeset signal values from ArrayAssist software

Data table
ID_REF VALUE
4304969 9.546766
4304973 8.009021
4305019 5.607392
4305053 8.0009775
4305096 5.8783636
4305160 8.9892435
4305182 5.659111
4305192 9.3477745
4305210 8.29379
4305223 8.060344
4305251 4.820975
4305305 8.253137
4305310 5.4444904
4305333 9.450204
4305357 9.505195
4305397 5.5918493
4305443 11.915552
4305486 9.1494665
4305534 4.7041717
4305570 7.8305

Total number of rows: 391597

Table truncated, full table size 6646 Kbytes.




Supplementary file Size Download File type/resource
GSM325139.CEL.gz 40.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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