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Sample GSM338480 Query DataSets for GSM338480
Status Public on Dec 31, 2008
Title wt4_mem_CD4
Sample type RNA
 
Source name wt_mem_CD4
Organism Mus musculus
Characteristics C57BL/6, Female, 8-12weeks,
Spleen, excised, 60min
Treatment protocol anti-CD4, anti-CD8, and anti-CD44 staining
Growth protocol RPMI+10 FCS
Extracted molecule total RNA
Extraction protocol RNeasy plus Mini kit (Qiagen)
Label biotin
Label protocol Affymetrix Mouse Exon Array labeling system
 
Hybridization protocol Affymetrix Gene Chip Fluidics station 450
Scan protocol Affymetrix GCS3000 7G
Description exon-level analysis
Data processing Exon- and gene-level data were generated using Partek Genomic Suite 6.3 software, with the defult algorithm of RMA.
 
Submission date Oct 31, 2008
Last update date Jan 04, 2012
Contact name Zuopeng Wu
E-mail(s) zuopeng.wu@anu.edu.au
Phone +61-2-61251392
Organization name John Curtin School of Medical Research
Department Dept. of Immunology & Genetics
Lab Immunogenomics Lab
Street address Garren Rd
City Canberra
State/province ACT
ZIP/Postal code 0200
Country Australia
 
Platform ID GPL6193
Series (1)
GSE13416 Memory T cell RNA rearrangement by hn RNP LL
Relations
Alternative to GSM338528 (gene-level analysis)

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304927 3.80313539505
4304928 12.138452529907
4304938 3.1429576873779
4304943 6.0391316413879
4304945 9.8132410049438
4304949 8.0427360534668
4304956 6.1949210166931
4304972 6.5645937919617
4304978 3.0702376365662
4304981 6.8918867111206
4304986 3.1841259002686
4304997 4.6122784614563
4305011 4.0810322761536
4305019 7.7395009994507
4305028 7.8834362030029
4305036 9.5472593307495
4305039 3.2578861713409
4305048 8.1209945678711
4305053 3.4845304489136
4305054 7.9714651107788

Total number of rows: 193380

Table truncated, full table size 4511 Kbytes.




Supplementary file Size Download File type/resource
GSM338480_wt4_mem_CD4.CEL 62.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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