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Sample GSM338488 Query DataSets for GSM338488
Status Public on Dec 31, 2008
Title wt4_mem_CD8
Sample type RNA
 
Source name wt_mem_CD8
Organism Mus musculus
Characteristics C57BL/6, Female, 8-12weeks,
Spleen, excised, 60min
Treatment protocol anti-CD4, anti-CD8, and anti-CD44 staining
Growth protocol RPMI+10 FCS
Extracted molecule total RNA
Extraction protocol RNeasy plus Mini kit (Qiagen)
Label biotin
Label protocol Affymetrix Mouse Exon Array labeling system
 
Hybridization protocol Affymetrix Gene Chip Fluidics station 450
Scan protocol Affymetrix GCS3000 7G
Description exon-level analysis
Data processing Exon- and gene-level data were generated using Partek Genomic Suite 6.3 software, with the defult algorithm of RMA.
 
Submission date Oct 31, 2008
Last update date Jan 04, 2012
Contact name Zuopeng Wu
E-mail(s) zuopeng.wu@anu.edu.au
Phone +61-2-61251392
Organization name John Curtin School of Medical Research
Department Dept. of Immunology & Genetics
Lab Immunogenomics Lab
Street address Garren Rd
City Canberra
State/province ACT
ZIP/Postal code 0200
Country Australia
 
Platform ID GPL6193
Series (1)
GSE13416 Memory T cell RNA rearrangement by hn RNP LL
Relations
Alternative to GSM338536 (gene-level analysis)

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304927 3.2747826576233
4304928 12.025592803955
4304938 2.8947148323059
4304943 4.3993463516235
4304945 9.9545440673828
4304949 7.7365679740906
4304956 6.0597648620605
4304972 7.6567506790161
4304978 3.1619193553925
4304981 7.0681648254395
4304986 2.947762966156
4304997 4.7097330093384
4305011 3.7295825481415
4305019 8.1768865585327
4305028 7.8362293243408
4305036 7.7190823554993
4305039 2.873767375946
4305048 8.1269035339355
4305053 4.2187271118164
4305054 7.5139846801758

Total number of rows: 193380

Table truncated, full table size 4511 Kbytes.




Supplementary file Size Download File type/resource
GSM338488_wt4_mem_CD8.CEL 62.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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