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Sample GSM400398 Query DataSets for GSM400398
Status Public on May 08, 2009
Title cerebellum 3
Sample type RNA
 
Source name cerebellum
Organism Mus musculus
Characteristics tissue: cerebellum
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description cerebellum
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.124235
4304921 2.459136
4304922 4.10491
4304923 6.485085
4304925 7.283398
4304927 3.246101
4304928 12.53304
4304929 10.116597
4304930 3.207437
4304931 3.937633
4304932 4.780577
4304933 3.989835
4304934 2.756608
4304935 5.140585
4304937 4.332956
4304938 2.790659
4304939 2.034375
4304940 3.239986
4304941 6.175725
4304942 8.018648

Total number of rows: 1201338

Table truncated, full table size 19838 Kbytes.




Supplementary file Size Download File type/resource
GSM400398.CEL.gz 39.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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