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Sample GSM400401 Query DataSets for GSM400401
Status Public on May 08, 2009
Title cerebral cortex prefrontal 6
Sample type RNA
 
Source name cerebral_cortex_prefrontal
Organism Mus musculus
Characteristics tissue: cerebral cortex prefrontal
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description cerebral_cortex_prefrontal
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 1.953039
4304921 2.340696
4304922 4.285767
4304923 7.164648
4304925 6.742838
4304927 2.861536
4304928 12.251122
4304929 10.304961
4304930 2.825808
4304931 3.344591
4304932 3.300642
4304933 5.299935
4304934 2.862939
4304935 3.208198
4304937 6.680554
4304938 3.055667
4304939 1.748621
4304940 3.695078
4304941 4.468773
4304942 7.592982

Total number of rows: 1201338

Table truncated, full table size 19838 Kbytes.




Supplementary file Size Download File type/resource
GSM400401.CEL.gz 38.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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