NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM400402 Query DataSets for GSM400402
Status Public on May 08, 2009
Title cerebral cortex prefrontal 7
Sample type RNA
 
Source name cerebral_cortex_prefrontal
Organism Mus musculus
Characteristics tissue: cerebral cortex prefrontal
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description cerebral_cortex_prefrontal
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.973214
4304921 2.7399
4304922 3.216653
4304923 7.171453
4304925 8.607517
4304927 2.356619
4304928 12.327409
4304929 10.302758
4304930 3.11263
4304931 3.567715
4304932 4.374135
4304933 3.537849
4304934 2.396824
4304935 3.003447
4304937 6.885662
4304938 2.854013
4304939 2.142585
4304940 3.544834
4304941 5.314051
4304942 7.989833

Total number of rows: 1201338

Table truncated, full table size 19838 Kbytes.




Supplementary file Size Download File type/resource
GSM400402.CEL.gz 39.0 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap