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Sample GSM400413 Query DataSets for GSM400413
Status Public on May 08, 2009
Title skeletal muscle 18
Sample type RNA
 
Source name skeletal_muscle
Organism Mus musculus
Characteristics tissue: skeletal muscle
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description skeletal_muscle
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 1.969563
4304921 2.123983
4304922 3.275786
4304923 6.146393
4304925 10.104905
4304927 3.414117
4304928 13.271473
4304929 10.696817
4304930 3.144269
4304931 6.40936
4304932 6.280131
4304933 4.91118
4304934 4.109423
4304935 2.070985
4304937 4.616782
4304938 2.924197
4304939 2.665235
4304940 4.724863
4304941 4.980691
4304942 7.984254

Total number of rows: 1201338

Table truncated, full table size 19839 Kbytes.




Supplementary file Size Download File type/resource
GSM400413.CEL.gz 37.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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