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Sample GSM400419 Query DataSets for GSM400419
Status Public on May 08, 2009
Title stomach 24
Sample type RNA
 
Source name stomach
Organism Mus musculus
Characteristics tissue: stomach
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description stomach
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 3.307658
4304921 2.143631
4304922 5.150479
4304923 4.915549
4304925 8.869668
4304927 2.840893
4304928 13.512652
4304929 9.93556
4304930 2.907897
4304931 4.471825
4304932 7.202201
4304933 7.344767
4304934 3.025594
4304935 4.651784
4304937 2.225178
4304938 3.748841
4304939 2.170095
4304940 2.945089
4304941 6.649396
4304942 8.39279

Total number of rows: 1201338

Table truncated, full table size 19840 Kbytes.




Supplementary file Size Download File type/resource
GSM400419.CEL.gz 37.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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