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Sample GSM400423 Query DataSets for GSM400423
Status Public on May 08, 2009
Title heart 28
Sample type RNA
 
Source name heart
Organism Mus musculus
Characteristics tissue: heart
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description heart
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.362753
4304921 2.472353
4304922 3.83247
4304923 6.519011
4304925 9.064106
4304927 2.800788
4304928 13.747705
4304929 10.280016
4304930 3.918679
4304931 3.779204
4304932 6.399797
4304933 5.997575
4304934 3.805752
4304935 2.92893
4304937 5.613385
4304938 2.046477
4304939 2.345708
4304940 5.034802
4304941 6.360111
4304942 8.379273

Total number of rows: 1201338

Table truncated, full table size 19840 Kbytes.




Supplementary file Size Download File type/resource
GSM400423.CEL.gz 38.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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