NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM400425 Query DataSets for GSM400425
Status Public on May 08, 2009
Title adipose brown 30
Sample type RNA
 
Source name adipose_brown
Organism Mus musculus
Characteristics tissue: adipose brown
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description adipose_brown
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 1.711052
4304921 2.095516
4304922 5.450217
4304923 6.922132
4304925 9.432394
4304927 2.512789
4304928 13.502587
4304929 9.767805
4304930 3.529909
4304931 4.636714
4304932 5.545987
4304933 6.207375
4304934 3.982174
4304935 3.325584
4304937 3.277544
4304938 2.894817
4304939 2.934507
4304940 4.010472
4304941 5.983957
4304942 8.15916

Total number of rows: 1201338

Table truncated, full table size 19840 Kbytes.




Supplementary file Size Download File type/resource
GSM400425.CEL.gz 39.6 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap