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Sample GSM400447 Query DataSets for GSM400447
Status Public on May 08, 2009
Title macrophage bone marrow 0hr 52
Sample type RNA
 
Source name macrophage_bone_marrow_0hr
Organism Mus musculus
Characteristics cell type: macrophage bone marrow 0hr
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description macrophage_bone_marrow_0hr
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.14533
4304921 2.385377
4304922 2.502931
4304923 5.010296
4304925 9.215456
4304927 3.084471
4304928 12.320153
4304929 9.337353
4304930 3.519887
4304931 4.243089
4304932 4.820496
4304933 5.000589
4304934 3.528885
4304935 2.00806
4304937 2.432854
4304938 7.145272
4304939 2.0228
4304940 4.225308
4304941 6.069184
4304942 8.045959

Total number of rows: 1201338

Table truncated, full table size 19844 Kbytes.




Supplementary file Size Download File type/resource
GSM400447.CEL.gz 38.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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