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Sample GSM400458 Query DataSets for GSM400458
Status Public on May 08, 2009
Title C2C12 63
Sample type RNA
 
Source name C2C12
Organism Mus musculus
Characteristics cell line: C2C12
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description C2C12
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.445468
4304921 2.225839
4304922 4.682151
4304923 6.864376
4304925 8.715272
4304927 2.816071
4304928 12.176335
4304929 9.889213
4304930 4.109842
4304931 3.877542
4304932 3.832817
4304933 6.71188
4304934 3.749507
4304935 3.335287
4304937 2.776334
4304938 7.421163
4304939 1.967382
4304940 3.763276
4304941 5.881882
4304942 7.951819

Total number of rows: 1201338

Table truncated, full table size 19838 Kbytes.




Supplementary file Size Download File type/resource
GSM400458.CEL.gz 38.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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