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Sample GSM400468 Query DataSets for GSM400468
Status Public on May 08, 2009
Title RAW 264 7 73
Sample type RNA
 
Source name RAW_264_7
Organism Mus musculus
Characteristics cell line: RAW 264 7
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description RAW_264_7
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.005768
4304921 3.087381
4304922 4.391823
4304923 7.692424
4304925 10.207159
4304927 3.750092
4304928 12.53298
4304929 9.854881
4304930 2.632623
4304931 4.033774
4304932 4.019455
4304933 5.394976
4304934 3.232706
4304935 2.954916
4304937 2.423568
4304938 7.230414
4304939 2.74357
4304940 3.339475
4304941 5.704463
4304942 7.88097

Total number of rows: 1201338

Table truncated, full table size 19844 Kbytes.




Supplementary file Size Download File type/resource
GSM400468.CEL.gz 38.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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