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Sample GSM400470 Query DataSets for GSM400470
Status Public on May 08, 2009
Title C3H/10T1/2 75
Sample type RNA
 
Source name C3H/10T1/2
Organism Mus musculus
Characteristics cell line: C3H/10T1/2
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description C3H/10T1/2
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.014771
4304921 2.566009
4304922 2.901635
4304923 7.692756
4304925 8.634568
4304927 2.439375
4304928 11.986477
4304929 9.759823
4304930 3.934628
4304931 3.331709
4304932 6.526178
4304933 5.397206
4304934 3.724336
4304935 3.094965
4304937 2.743937
4304938 6.953904
4304939 2.201442
4304940 4.626985
4304941 6.186377
4304942 8.400481

Total number of rows: 1201338

Table truncated, full table size 19841 Kbytes.




Supplementary file Size Download File type/resource
GSM400470.CEL.gz 38.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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