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Sample GSM400471 Query DataSets for GSM400471
Status Public on May 08, 2009
Title C3H/10T1/2 76
Sample type RNA
 
Source name C3H/10T1/2
Organism Mus musculus
Characteristics cell line: C3H/10T1/2
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description C3H/10T1/2
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 1.915771
4304921 2.039556
4304922 3.171647
4304923 7.709043
4304925 8.469999
4304927 2.85489
4304928 11.971922
4304929 10.260576
4304930 2.76785
4304931 3.661742
4304932 5.977549
4304933 5.276034
4304934 3.713707
4304935 2.829611
4304937 2.015026
4304938 6.969743
4304939 2.258885
4304940 3.330232
4304941 6.573444
4304942 8.061429

Total number of rows: 1201338

Table truncated, full table size 19844 Kbytes.




Supplementary file Size Download File type/resource
GSM400471.CEL.gz 38.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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