NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM400479 Query DataSets for GSM400479
Status Public on May 08, 2009
Title uterus 84
Sample type RNA
 
Source name uterus
Organism Mus musculus
Characteristics tissue: uterus
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description uterus
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.225849
4304921 2.598896
4304922 4.303208
4304923 6.438718
4304925 5.899938
4304927 6.082438
4304928 11.844868
4304929 10.496957
4304930 2.842182
4304931 3.795921
4304932 7.146341
4304933 6.863828
4304934 4.063869
4304935 4.52015
4304937 3.316273
4304938 2.922939
4304939 2.280949
4304940 2.433859
4304941 5.500087
4304942 8.622866

Total number of rows: 1201338

Table truncated, full table size 19840 Kbytes.




Supplementary file Size Download File type/resource
GSM400479.CEL.gz 39.7 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap