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Sample GSM400482 Query DataSets for GSM400482
Status Public on May 08, 2009
Title lung 87
Sample type RNA
 
Source name lung
Organism Mus musculus
Characteristics tissue: lung
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description lung
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.024355
4304921 2.211033
4304922 4.62436
4304923 6.402975
4304925 6.879136
4304927 2.815014
4304928 11.41395
4304929 10.233229
4304930 2.889254
4304931 4.542408
4304932 7.491655
4304933 6.234133
4304934 3.850414
4304935 2.960135
4304937 2.755514
4304938 2.332919
4304939 1.976939
4304940 3.500614
4304941 5.002417
4304942 8.201146

Total number of rows: 1201338

Table truncated, full table size 19841 Kbytes.




Supplementary file Size Download File type/resource
GSM400482.CEL.gz 39.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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