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Sample GSM400493 Query DataSets for GSM400493
Status Public on May 08, 2009
Title bone 98
Sample type RNA
 
Source name bone
Organism Mus musculus
Characteristics tissue: bone
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description bone
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 1.786076
4304921 2.436228
4304922 3.389394
4304923 4.864272
4304925 6.522886
4304927 4.541161
4304928 12.011592
4304929 10.423261
4304930 3.731594
4304931 5.115627
4304932 4.923361
4304933 6.199985
4304934 3.860903
4304935 3.031836
4304937 2.341967
4304938 6.890517
4304939 2.270423
4304940 3.345632
4304941 5.641754
4304942 8.145014

Total number of rows: 1201338

Table truncated, full table size 19839 Kbytes.




Supplementary file Size Download File type/resource
GSM400493.CEL.gz 38.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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