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Sample GSM484759 Query DataSets for GSM484759
Status Public on Dec 14, 2009
Title LuRKO d19 testis + 2.5mg testosterone - 12hA
Sample type RNA
 
Source name Testis, LH receptor knockout, 19 days post partum, treated with 2.5mg testosterone, response timecourse
Organism Mus musculus
Characteristics genotype/variation: LuRKO
tissue: testis
age post partum: 19 days + 12 hrs
testosterone dose: 2.5mg
time post testosterone injection: 12 hrs
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 256.3859 0
ILMN_1212603 64.84187 0.9
ILMN_1212605 548.2029 0
ILMN_1212607 85.55009 0.2644444
ILMN_1212612 90.04137 0.1955556
ILMN_1212614 72.67545 0.6555555
ILMN_1212619 255.5382 0
ILMN_1212623 79.38983 0.4288889
ILMN_1212625 1163.279 0
ILMN_1212626 262.1741 0
ILMN_1212628 72.10398 0.6855556
ILMN_1212632 143.3579 0
ILMN_1212633 241.8102 0
ILMN_1212636 9491.762 0
ILMN_1212637 930.5002 0
ILMN_1212638 13904.41 0
ILMN_1212639 175.8649 0
ILMN_1212644 88.09893 0.2188889
ILMN_1212645 96.71208 0.1122222
ILMN_1212646 3486.162 0

Total number of rows: 45281

Table truncated, full table size 1234 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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