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Sample GSM484767 Query DataSets for GSM484767
Status Public on Dec 14, 2009
Title LuRKO d19 testis + testosterone, 24h post injection - 2.5ug B
Sample type RNA
 
Source name Testis, LH receptor knockout, dose/response to testosterone treatment given at 19 days post partum, assayed 24h post injection
Organism Mus musculus
Characteristics genotype/variation: LuRKO
tissue: testis
age post partum: 19 days + 24 hrs
testosterone dose: 2.5ug
time post testosterone injection: 24 hrs
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 165.1466 0
ILMN_1212603 90.61088 0.1854749
ILMN_1212605 566.2854 0
ILMN_1212607 97.34821 0.1217877
ILMN_1212612 111.0892 0.01899441
ILMN_1212614 67.44765 0.8234637
ILMN_1212619 174.7086 0
ILMN_1212623 105.351 0.05139665
ILMN_1212625 1043.073 0
ILMN_1212626 284.2155 0
ILMN_1212628 80.46895 0.4089386
ILMN_1212632 108.5379 0.03128492
ILMN_1212633 218.9047 0
ILMN_1212636 8704.447 0
ILMN_1212637 979.2911 0
ILMN_1212638 15805.6 0
ILMN_1212639 139.2026 0
ILMN_1212644 71.82486 0.6826816
ILMN_1212645 104.8473 0.05363128
ILMN_1212646 3034.587 0

Total number of rows: 45281

Table truncated, full table size 1245 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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