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Sample GSM484783 Query DataSets for GSM484783
Status Public on Dec 14, 2009
Title Control testis - postpartum development - N 8 day A
Sample type RNA
 
Source name Testis, age-matched controls, postnatal developmental series
Organism Mus musculus
Characteristics genotype/variation: WT
tissue: testis
age post partum: 8 days
testosterone dose: none
time post testosterone injection: n/a
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 317.8857 0
ILMN_1212603 75.59155 0.5773081
ILMN_1212605 645.8194 0
ILMN_1212607 107.6379 0.03893215
ILMN_1212612 156.9238 0
ILMN_1212614 58.38093 0.9822025
ILMN_1212619 336.3267 0
ILMN_1212623 76.13033 0.5595106
ILMN_1212625 622.9279 0
ILMN_1212626 1181.472 0
ILMN_1212628 75.49021 0.5806451
ILMN_1212632 197.7628 0
ILMN_1212633 117.7955 0.001112347
ILMN_1212636 4298.694 0
ILMN_1212637 2299.088 0
ILMN_1212638 19659 0
ILMN_1212639 152.1334 0
ILMN_1212644 81.62733 0.3948832
ILMN_1212645 75.91856 0.5650723
ILMN_1212646 1847.201 0

Total number of rows: 45281

Table truncated, full table size 1248 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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