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Sample GSM5365920 Query DataSets for GSM5365920
Status Public on Jun 22, 2023
Title Patient24 meningioma
Sample type genomic
 
Source name meningioma
Organism Homo sapiens
Characteristics prior sample id: 351
Sex: MALE
age: 24
who grade: II
reoperation: No
progression: No
Extracted molecule genomic DNA
Extraction protocol Tumor/dura samples were obtained at the time of surgery. DNA was extracted using Qiagen DNeasy Blood & Tissue Kit (Cat No./ID: 69506).
Label Cy5 and Cy3
Label protocol standard Illumina HumanOmni-Express v12.1 BeadChip SNP array protocol
 
Hybridization protocol standard Illumina HumanOmni-Express v12.1 BeadChip SNP array protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description meningioma
Data processing Data were analyzed in Illumina GenomeStudio v2.0.5 with cnvPartition Plug-in v3.2.1
Genotype: AA,AB,BB,or NC (no call)
 
Submission date Jun 09, 2021
Last update date Jun 22, 2023
Contact name Michelle Ariana Wedemeyer
E-mail(s) michelle.ariana.wedemeyer@gmail.com
Organization name University of Southern California
Department Neurosurgery
Street address 1200 N State St, Suite 3300
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platform ID GPL18900
Series (2)
GSE176457 DNA Methylation Signatures Differentiate Meningiomas from Normal Dura [OmniSNP]
GSE178143 DNA Methylation Signatures Differentiate Meningiomas from Normal Dura

Supplementary file Size Download File type/resource
GSM5365920_6218326276_R01C01_Grn.idat.gz 4.7 Mb (ftp)(http) IDAT
GSM5365920_6218326276_R01C01_Red.idat.gz 4.7 Mb (ftp)(http) IDAT
Processed data are available on Series record

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