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Sample GSM589222 Query DataSets for GSM589222
Status Public on Sep 01, 2010
Title Male Breast 24
Sample type genomic
 
Source name breast
Organism Homo sapiens
Characteristics gender: male
tissue: breast cancer tumor
Extracted molecule genomic DNA
Extraction protocol standard Agilent CGH protocol
Label Cy3
Label protocol standard Agilent CGH protocol
 
Hybridization protocol standard Agilent CGH protocol
Scan protocol standard Agilent CGH protocol
Description diagnosis at Regina Elena
Data processing Agilent Feature Extraction Software (8.1.1.1 for GPL2879, 9.5.1.1 for GPL5477)
 
Submission date Aug 31, 2010
Last update date Aug 31, 2010
Contact name Pina Iannelli
E-mail(s) bioinformatics.losc@oncologico.bari.it
Organization name National Cancer Centre "Giovanni Paolo II"
Lab Clinical Experimental Oncology Laboratory
Street address viale Orazio Flacco, 65
City Bari
ZIP/Postal code 70124
Country Italy
 
Platform ID GPL5477
Series (1)
GSE23891 Gene copy number variation in male breast cancer by aCGH

Data table header descriptions
ID_REF
VALUE processed Cy3 signal intensity

Data table
ID_REF VALUE
1 9.219104e+003
2 1.779493e+001
3 1.775783e+001
4 1.772034e+001
5 1.768509e+001
6 1.765161e+001
7 1.761874e+001
8 1.758805e+001
9 1.755830e+001
10 1.753008e+001
11 1.750337e+001
12 2.717066e+003
13 1.239812e+003
14 5.267663e+003
15 7.200451e+002
16 1.408504e+003
17 4.141226e+003
18 5.312018e+002
19 3.897386e+002
20 6.248262e+002

Total number of rows: 45214

Table truncated, full table size 872 Kbytes.




Supplementary file Size Download File type/resource
GSM589222_Pavia_251495012798_S01_CGH-v4_95_Feb07_1_3.txt.gz 12.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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