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Sample GSM7988220 Query DataSets for GSM7988220
Status Public on Dec 22, 2023
Title Control #117
Sample type protein
 
Source name CSF
Organism Homo sapiens
Characteristics Sex: Male
age: 47
group: Control
Treatment protocol n/a
Growth protocol n/a
Extracted molecule protein
Extraction protocol Serum samples were assayed at three dilutions (40%, 1%, and 0.005%) with each sample dilution added to a corresponding subset of the 1,305 SOMAmer detection reagents binned according to manufacturer’s predicted target abundance in serum. Cerebrospinal fluid was run at a single 15% concentration dilution with protease inhibitors and polyanionic competitor reagent added.
Label n/a
Label protocol Labeling was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA).
 
Hybridization protocol Hypbridization was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA).
Scan protocol Scanning was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA).
Description Fatigue-132
Control
Data processing Data processing was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA). In brief, systematic effects on the data introduced during the hybridization step were corrected followed by median normalization (i.e., hybNorm.plateScale.medNorm).
 
Submission date Dec 21, 2023
Last update date Dec 22, 2023
Contact name Avindra Nath
E-mail(s) avindra.nath@nih.gov
Phone 3014961561
Organization name NIH/NINDS
Street address 10 Center Drive
City Bethesda
State/province Maryland
ZIP/Postal code 20814
Country USA
 
Platform ID GPL28516
Series (2)
GSE251790 Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome [Protein]
GSE251792 Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome

Data table header descriptions
ID_REF
VALUE Linear intensity

Data table
ID_REF VALUE
SL019100 37.5
SL007136 26.9
SL001731 14024.8
SL019096 22.2
SL005173 117.2
SL007221 207.6
SL007108 195.7
SL000455 59.3
SL003755 63
SL014684 39
SL002565 37.2
SL004097 90.2
SL004101 53
SL005184 78.7
SL001728 433.7
SL001716 19
SL004396 33.4
SL007229 89.6
SL017128 247.1
SL001791 1565.2

Total number of rows: 1317

Table truncated, full table size 19 Kbytes.




Supplementary data files not provided

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