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| Status |
Public on Mar 18, 2021 |
| Title |
SOMAscan human proteomic assay |
| Technology type |
spotted peptide or protein |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
SomaLogic |
| Manufacture protocol |
http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf
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| Submission date |
May 11, 2020 |
| Last update date |
Mar 18, 2021 |
| Contact name |
Hui Pan |
| E-mail(s) |
Hui.Pan@joslin.harvard.edu
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| Organization name |
Joslin Diabetes Center
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| Department |
Bioinformatics and Biostatistics Core
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| Street address |
1 Joslin Place
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| City |
Boston |
| ZIP/Postal code |
02215 |
| Country |
USA |
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| Samples (139)
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GSM4544751, GSM4544752, GSM4544753, GSM4544754, GSM4544755, GSM4544756
GSM4544757, GSM4544758, GSM4544759, GSM4544760, GSM4544761, GSM4544762, GSM4544763, GSM4544764, GSM4544765, GSM4544766, GSM4544767, GSM4544768, GSM4544769, GSM4544770, GSM4544771, GSM4544772, GSM4544773, GSM4544774, GSM4544775, GSM4544776, GSM4544777, GSM4544778, GSM4953750, GSM4953751, GSM4953752, GSM4953753, GSM4953754, GSM4953755, GSM4953756, GSM4953757, GSM4953758, GSM4953759, GSM4953760, GSM4953761, GSM4953762, GSM4953763, GSM4953764, GSM4953765, GSM4953766, GSM4953767, GSM4953768, GSM4953769, GSM4953770, GSM4953771, GSM4953772, GSM4953773, GSM4953774, GSM4953775, GSM4953776, GSM7988184, GSM7988185, GSM7988186, GSM7988187, GSM7988188, GSM7988189, GSM7988190, GSM7988191, GSM7988192, GSM7988193, GSM7988194, GSM7988195, GSM7988196, GSM7988197, GSM7988198, GSM7988199, GSM7988200, GSM7988201, GSM7988202, GSM7988203, GSM7988204, GSM7988205, GSM7988206, GSM7988207, GSM7988208, GSM7988209, GSM7988210, GSM7988211, GSM7988212, GSM7988213, GSM7988214, GSM7988215, GSM7988216, GSM7988217, GSM7988218, GSM7988219, GSM7988220, GSM7988221, GSM7988222, GSM7988223, GSM7988224, GSM7988225, GSM8032049, GSM8032050, GSM8032051, GSM8032052, GSM8032053, GSM8032054, GSM8032055, GSM8032056, GSM8032057, GSM8032058, GSM8032059, GSM8032060, GSM8032061, GSM8032062, GSM8032063, GSM8032064, GSM8032065, GSM8032066, GSM8032067, GSM8032068, GSM8032069, GSM8032070, GSM8032071, GSM8032072, GSM8032073, GSM8032074, GSM8032075, GSM8032076, GSM8032077, GSM8032078, GSM8032079, GSM8032080, GSM8032081, GSM8032082, GSM8032083, GSM8032084, GSM8032085, GSM8032086, GSM8032087, GSM8032088, GSM8032089, GSM8032090
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| Series (5)
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| GSE150285 |
SASP signature of beta-cells includes pro-inflammatory and stress response proteins |
| GSE162521 |
Unique human beta-cell senescence-associated secretory phenotype (SASP) reveal conserved signaling pathways and heterogeneous factors |
| GSE251790 |
Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome [Protein] |
| GSE251792 |
Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome |
| GSE254030 |
Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome [Protein plasma] |
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| Data table header descriptions |
| ID |
SomaId; SomaLogic ID |
| TargetFullName |
Protein full name |
| Target |
Protein short name |
| PT_LIST |
UniProt Universal Protein Resource ID |
| Entrez_GENE_ID_LIST |
Entrez Gene ID |
| EntrezGeneSymbol |
Entrez Gene symbol |
| SPOT_ID |
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| Data table |
| ID |
TargetFullName |
Target |
PT_LIST |
Entrez_GENE_ID_LIST |
EntrezGeneSymbol |
SPOT_ID |
| SL019100 |
E3 ubiquitin-protein ligase CHIP |
CHIP |
Q9UNE7 |
10273 |
STUB1 |
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| SL007136 |
CCAAT/enhancer-binding protein beta |
CEBPB |
P17676 |
1051 |
CEBPB |
|
| SL001731 |
Gamma-enolase |
NSE |
P09104 |
2026 |
ENO2 |
|
| SL019096 |
E3 SUMO-protein ligase PIAS4 |
PIAS4 |
Q8N2W9 |
51588 |
PIAS4 |
|
| SL005173 |
Interleukin-10 receptor subunit alpha |
IL-10 Ra |
Q13651 |
3587 |
IL10RA |
|
| SL007221 |
Signal transducer and activator of transcription 3 |
STAT3 |
P40763 |
6774 |
STAT3 |
|
| SL007108 |
Interferon regulatory factor 1 |
IRF1 |
P10914 |
3659 |
IRF1 |
|
| SL000455 |
Transcription factor AP-1 |
c-Jun |
P05412 |
3725 |
JUN |
|
| SL003755 |
Induced myeloid leukemia cell differentiation protein Mcl-1 |
Mcl-1 |
Q07820 |
4170 |
MCL1 |
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| SL014684 |
2'-5'-oligoadenylate synthase 1 |
OAS1 |
P00973 |
4938 |
OAS1 |
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| SL002565 |
Myc proto-oncogene protein |
c-Myc |
P01106 |
4609 |
MYC |
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| SL004097 |
Mothers against decapentaplegic homolog 3 |
SMAD3 |
P84022 |
4088 |
SMAD3 |
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| SL004101 |
Mothers against decapentaplegic homolog 2 |
SMAD2 |
Q15796 |
4087 |
SMAD2 |
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| SL005184 |
Interleukin-23 |
IL-23 |
P29460, Q9NPF7 |
3593 51561 |
IL12B IL23A |
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| SL001728 |
Platelet-derived growth factor receptor alpha |
PDGFRA |
P16234 |
5156 |
PDGFRA |
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| SL001716 |
Interleukin-12 |
IL-12 |
P29459, P29460 |
3592 3593 |
IL12A IL12B |
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| SL004396 |
Signal transducer and activator of transcription 1-alpha/beta |
STAT1 |
P42224 |
6772 |
STAT1 |
|
| SL007229 |
Signal transducer and activator of transcription 6 |
STAT6 |
P42226 |
6778 |
STAT6 |
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| SL017128 |
Leucine-rich repeat serine/threonine-protein kinase 2 |
LRRK2 |
Q5S007 |
|
LRRK2 |
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| SL001791 |
Osteocalcin |
Osteocalcin |
P02818 |
632 |
BGLAP |
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Total number of rows: 1317
Table truncated, full table size 85 Kbytes.
| Supplementary data files not provided |
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