NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM7988224 Query DataSets for GSM7988224
Status Public on Dec 22, 2023
Title Control #105
Sample type protein
 
Source name CSF
Organism Homo sapiens
Characteristics Sex: Male
age: 60
group: Control
Treatment protocol n/a
Growth protocol n/a
Extracted molecule protein
Extraction protocol Serum samples were assayed at three dilutions (40%, 1%, and 0.005%) with each sample dilution added to a corresponding subset of the 1,305 SOMAmer detection reagents binned according to manufacturer’s predicted target abundance in serum. Cerebrospinal fluid was run at a single 15% concentration dilution with protease inhibitors and polyanionic competitor reagent added.
Label n/a
Label protocol Labeling was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA).
 
Hybridization protocol Hypbridization was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA).
Scan protocol Scanning was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA).
Description Fatigue-105
Control
Data processing Data processing was performed according to manufacturers instructions for the SOMAscan Assay v3.2 standard protocol (SomaLogic, Boulder, CO, USA). In brief, systematic effects on the data introduced during the hybridization step were corrected followed by median normalization (i.e., hybNorm.plateScale.medNorm).
 
Submission date Dec 21, 2023
Last update date Dec 22, 2023
Contact name Avindra Nath
E-mail(s) avindra.nath@nih.gov
Phone 3014961561
Organization name NIH/NINDS
Street address 10 Center Drive
City Bethesda
State/province Maryland
ZIP/Postal code 20814
Country USA
 
Platform ID GPL28516
Series (2)
GSE251790 Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome [Protein]
GSE251792 Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome

Data table header descriptions
ID_REF
VALUE Linear intensity

Data table
ID_REF VALUE
SL019100 39.9
SL007136 18.4
SL001731 16846
SL019096 20.6
SL005173 106.5
SL007221 167.2
SL007108 192.3
SL000455 43.5
SL003755 67.7
SL014684 33
SL002565 31.4
SL004097 60.5
SL004101 45.7
SL005184 61.3
SL001728 377
SL001716 21.3
SL004396 25.2
SL007229 66.8
SL017128 244.7
SL001791 1252.5

Total number of rows: 1317

Table truncated, full table size 19 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap