|
| Status |
Public on May 01, 2024 |
| Title |
5iLA_to_AXGY_OSKL_3 |
| Sample type |
genomic |
| |
|
| Source name |
Human induced pluripotent stem cells
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: Naive induced pluripotent stem cells
gender: Female
|
| Growth protocol |
Naive PSCs were cultured on iMEFs and maintained in the naive medium.
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA were extracted from cell lysates using the AllPrep DNA/RNA Mini Kit (QIAGEN)
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
The Genomic DNA was hybridized onto the Infinium OmniExpress24 v1.4 DNA Analysis Kit (Illumina)
|
| Scan protocol |
Using Illumina iScan according to recommended scanner setting
|
| Description |
Naive induced pluripotent stem cells derived from human dermal fibroblasts
|
| Data processing |
GenomeStudio (2.0.4)
Log R ratio
|
| |
|
| Submission date |
Jan 22, 2024 |
| Last update date |
May 01, 2024 |
| Contact name |
Akira Kunitomi |
| E-mail(s) |
akira.kunitomi@gladstone.ucsf.edu
|
| Organization name |
The J. David Gladstone Institutes
|
| Street address |
1650 Owens Street
|
| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94158 |
| Country |
USA |
| |
|
| Platform ID |
GPL34118 |
| Series (2) |
| GSE224850 |
H1FOO-DD promotes efficiency and uniformity in reprogramming to naive pluripotency |
| GSE253926 |
SNP genotyping array of human naive pluripotent stem cells II |
|
