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Sample GSM984058 Query DataSets for GSM984058
Status Public on Aug 11, 2012
Title Bone marrow mesenchymal stem cells from psoriasis patient,replicate 6
Sample type RNA
 
Source name Bone marrow mesenchymal stem cells from psoriasis patient 6
Organism Homo sapiens
Characteristics tissue: bone marrow
cell type: mesenchymal stem cells
subject status: psoriasis patient
Growth protocol Bone marrow mononuclear cells (BMMNC) of 7 psoriatic patients, 4 healthy volunteers and 3 aborted fetuses were isolated and the BMMSCs were cultured using the adherent method.
Extracted molecule total RNA
Extraction protocol Total RNA from BMMNC was extracted using Trizol reagent (Invitrogen, Gaithersburg, MD) according to the manufacturer’s instructions.
Label Cy5
Label protocol RNA was amplified and labeled with Cy5 using Agilent’s Low Input Quick Amp WT Labeling Kit according to the manufacturer’s instruction
 
Hybridization protocol According to the instructions of Agilent Gene Expression Hybridization Kit.
Scan protocol Scanned on an Agilent G2505C scanner.
Description psoriasis patient
US10283824_252800411426_S01_GE1_107_Sep09_2_3
Data processing Images were quantified using Agilent Feature Extraction Software (version 10.7.3.1).Agilent GeneSpring GX 11.5 was used for background subtraction and LOWESS normalization.
 
Submission date Aug 10, 2012
Last update date Aug 11, 2012
Contact name wang liang
E-mail(s) wangliangkexue@163.com
Organization name BioChainBJ
Street address 7A North Yongchang Road BDA
City Beijing
ZIP/Postal code 100176
Country China
 
Platform ID GPL14550
Series (1)
GSE40033 The gene expression pattern of bone marrow mesenchymal stem cells from patients with psoriasis

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
A_19_P00315452 46
A_19_P00315459 82
A_19_P00315469 28
A_19_P00315473 30
A_19_P00315482 28
A_19_P00315490 29
A_19_P00315492 26
A_19_P00315493 144
A_19_P00315496 26
A_19_P00315499 153
A_19_P00315502 32
A_19_P00315504 48
A_19_P00315506 132
A_19_P00315508 26
A_19_P00315518 30
A_19_P00315519 27
A_19_P00315523 148
A_19_P00315524 140
A_19_P00315526 218
A_19_P00315527 209

Total number of rows: 42405

Table truncated, full table size 724 Kbytes.




Supplementary file Size Download File type/resource
GSM984058_US10283824_252800411426_S01_GE1_107_Sep09_2_3.txt.gz 3.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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