GEO DataSets

(Submitter supplied) As mechanical stimuli, sound vibrations are known to influence various molecular and physiological processes that can ultimately improve crop performance and yield. Microarray analyses were carried out to investigate the global gene expression changes in MicroTom plants subjected to 1000 Hz sound vibration prior to infection with Pst DC300 to test the effectiveness of sound as a priming agent. Data revealed that 1000 Hz pretreatment is effective in eliciting a transcriptional reprogramming in tomato plants grown under normal conditions, but particularly after Pst DC3000 infection. more...

Organism:

Solanum lycopersicum

Type:

Expression profiling by array

Platform:

GPL21525

24 Samples

Download data: CEL, CHP

(Submitter supplied) After treatment with peptids, SA, JA and Et plants are primed due to the induction of plant immune system allowing to fight against plant pathogens. We used microarray analysis to study the expression pattern of the diferents genes involved in plant defense mechanisms related to biotic and abiotic stresses

Organism:

Solanum lycopersicum

Type:

Expression profiling by array

Platform:

GPL21525

21 Samples

Download data: CEL

(Submitter supplied) The res (restored cell structure by salinity) mutant exhibits a remarkable growth inhibition and morphological alterations in roots and leaves, which are suppressed when the mutant plants are exposed to salinity. The analysis of mutants like res may be very helpful in understanding how plants are able to coordinate the balance between growth and stress, a fundamental and not fully-understood question of important agronomical implications In order to understand the molecular basis of phenotype recovery and tolerance induced by salt stress in res mutant, we carried out a comparative transcriptomic analysis between res and WT plants. more...

Organism:

Solanum lycopersicum

Type:

Expression profiling by array

Platform:

GPL21525

24 Samples

Download data: CEL, CHP

(Submitter supplied) The aim of this study is to generate gene regulatory networks by analyzing Affymetrix GeneChip expression datasets from four different stages of tomato fruit ripening, Breaker (Br), Turning (Tu), Pink (Pk) and Red Ripe (RR) with the LeMoNe algorithm in order to identify co expression modules and their putative regulatory TFs.

Organism:

Solanum lycopersicum

Type:

Expression profiling by array

Platform:

GPL21525

9 Samples

Download data: CEL, CHP

(Submitter supplied) #%create_date=Mon Aug 5 12:39:13 PDT 2013 #%chip_type=TomGene-1_1-st #%lib_set_name=TomGene-1_1-st #%lib_set_version=r4 #%genome-species=Solanum lycopersicum #%genome-version=SL2_40 #%genome-version-create_date=2011_04_06 #%annotation-version=design-time ## probeset_id refers to the transcript cluster id Protocol: see manufacturer's web site

Organism:

Solanum lycopersicum

4 Series

78 Samples

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