GSE29611[Accession] - GEO DataSets - NCBI

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Select item 2000296111.

Histone Modifications by ChIP-seq from ENCODE/Broad Institute

(Submitter supplied) This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (mailto:nshoresh@broad.mit.edu). If you have questions about the Genome Browser track associated with this data, contact ENCODE (mailto:genome@soe.ucsc.edu). This track displays maps of chromatin state generated by the Broad/MGH ENCODE group using ChIP-seq. Chemical modifications (methylation, acetylation) to the histone proteins present in chromatin influence gene expression by changing how accessible the chromatin is to transcription. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL11154 GPL9115 GPL10999
296 Samples

Download data: BAM, BIGWIG, BROADPEAK, TXT

Series

Accession:: GSE29611

ID:: 200029611

PubMed Full text in PMC Similar studies ENCODE SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 1000109993.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:: Homo sapiens

1096 Series
9927 Samples

Platform

Accession:: GPL10999

ID:: 100010999

Select item 1000091154.

Illumina Genome Analyzer II (Homo sapiens)

Organism:: Homo sapiens

753 Series
6113 Samples

Platform

Accession:: GPL9115

ID:: 100009115

Select item 3010035365.

Broad_ChipSeq_Monocytes-CD14+_RO01746_H3K4me3

Organism:: Homo sapiens

Source name:: Monocytes-CD14+_RO01746

Platform:: GPL11154
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003536

ID:: 301003536

SRA Run Selector

Select item 3010035356.

Broad_ChipSeq_Monocytes-CD14+_RO01746_H3K4me1

Organism:: Homo sapiens

Source name:: Monocytes-CD14+_RO01746

Platform:: GPL11154
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003535

ID:: 301003535

SRA Run Selector

Select item 3010035347.

Broad_ChipSeq_NH-A_H3K9ac

Organism:: Homo sapiens

Source name:: NH-A

Platform:: GPL11154
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003534

ID:: 301003534

SRA Run Selector

Select item 3010035338.

Broad_ChipSeq_NH-A_H3K4me2

Organism:: Homo sapiens

Source name:: NH-A

Platform:: GPL11154
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003533

ID:: 301003533

SRA Run Selector

Select item 3010035329.

Broad_ChipSeq_NH-A_EZH2_(39875)

Organism:: Homo sapiens

Source name:: NH-A

Platform:: GPL10999
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003532

ID:: 301003532

SRA Run Selector

Select item 30100353110.

Broad_ChipSeq_NHLF_H3K9me3

Organism:: Homo sapiens

Source name:: NHLF

Platform:: GPL10999
Series:: GSE29611 GSE51334

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003531

ID:: 301003531

SRA Run Selector

Select item 30100353011.

Broad_ChipSeq_NHLF_H2A.Z

Organism:: Homo sapiens

Source name:: NHLF

Platform:: GPL10999
Series:: GSE29611 GSE51334

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003530

ID:: 301003530

SRA Run Selector

Select item 30100352912.

Broad_ChipSeq_NHLF_EZH2_(39875)

Organism:: Homo sapiens

Source name:: NHLF

Platform:: GPL10999
Series:: GSE29611 GSE51334

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003529

ID:: 301003529

SRA Run Selector

Select item 30100352513.

Broad_ChipSeq_NH-A_H4K20me1

Organism:: Homo sapiens

Source name:: NH-A

Platform:: GPL9115
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003525

ID:: 301003525

SRA Run Selector

Select item 30100350614.

Broad_ChipSeq_Osteobl_H3K4me3

Organism:: Homo sapiens

Source name:: Osteobl

Platform:: GPL9115
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003506

ID:: 301003506

SRA Run Selector

Select item 30100350315.

Broad_ChipSeq_HSMMtube_H3K27me3

Organism:: Homo sapiens

Source name:: HSMMtube

Platform:: GPL9115
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003503

ID:: 301003503

SRA Run Selector

Select item 30100348616.

Broad_ChipSeq_NHDF-Ad_H4K20me1

Organism:: Homo sapiens

Source name:: NHDF-Ad

Platform:: GPL9115
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003486

ID:: 301003486

SRA Run Selector

Select item 30100346717.

Broad_ChipSeq_Osteobl_H4K20me1

Organism:: Homo sapiens

Source name:: Osteobl

Platform:: GPL9115
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003467

ID:: 301003467

SRA Run Selector

Select item 30100346618.

Broad_ChipSeq_Osteobl_H3K27me3

Organism:: Homo sapiens

Source name:: Osteobl

Platform:: GPL9115
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003466

ID:: 301003466

SRA Run Selector

Select item 30100358219.

Broad_ChipSeq_A549_CTCF_DEX_100nM

Organism:: Homo sapiens

Source name:: A549

Platform:: GPL11154
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003582

ID:: 301003582

SRA Run Selector

Select item 30100358120.

Broad_ChipSeq_A549_CTCF_EtOH_0.02pct

Organism:: Homo sapiens

Source name:: A549

Platform:: GPL11154
Series:: GSE29611

Download data: BIGWIG, BROADPEAK

Sample

Accession:: GSM1003581

ID:: 301003581

SRA Run Selector

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